Thank you for your comments but DQF-COSY is not my case :-) I certainly use phase-sensitive cosy data but I am still quite hopeless about the diagonal...
1006
ozzy672003
Jul 4, 2005 8:10 pm
HI Everyone I have discovered that when I use ssh for parallelisation with nmrShell eg. as follows nmrShell -rsh ssh -par pipe.net -sh nmr1.com -path ...
1007
mariacristina valerio
mcrivalerio
Jul 18, 2005 1:09 pm
Hello nmrpipers. I am a new user of nmrpipe and I'm trying to work up a simple 2D H,H NOESY from bruker 500 AMX (Avance). I'm having a trouble with processing,...
1008
Frank Delaglio
bigfdelaglio
Jul 18, 2005 1:24 pm
Huzzah!!! If the aquisition mode is "DQD", then this is DMX format (digital) data, not AMX. The other clue is the fact that there are values for "-decim" and...
1009
reedma2000
Aug 1, 2005 4:04 pm
I want to process some crinept data acquired on a varian spectrometer. The header in the pulse sequence file of crinept.c indicates that the data should be...
1010
Shaheen Shojania
umshoja0
Aug 2, 2005 10:43 am
I had to process crinept once and I used something like the IPAP script
in the nmrpipe sample data. It seemed to do the trick, but someone else
out there may...
1011
Frank Delaglio
bigfdelaglio
Aug 2, 2005 3:48 pm
A special macro is probably not required; there is already an NMRPipe COADD function which can combine points or vectors ... NMRPipe Processing Function COADD ...
1012
yufeiustc8
Aug 3, 2005 2:19 pm
Hello everyone, As a nmrPipe new user, I would like to know how to inetegrate 2D spectrum using nmePipe. I know by some other programs like Felix, you can...
1013
Michelle Reed
reedma2000
Aug 4, 2005 2:48 pm
Thanks very much to the 3 people who replied to my last email. Unfortunately, being a bit new to nmrpipe I still can't quite make anything work! Using the...
1014
Frank Delaglio
bigfdelaglio
Aug 5, 2005 1:05 pm
MY O MY!!! ... That's impressive!! When a QMIX coefficient is specified as two numbers seperated by commas, it is treated as a complex value. So, the cList...
1015
Valerie Booth
valerie@...
Aug 5, 2005 1:46 pm
.............................. Dr. Valerie Booth Assistant Professor Memorial University of Newfoundland Department of Biochemistry and Department of Physics...
1016
Shaheen Shojania
umshoja0
Aug 5, 2005 3:21 pm
Try something simple. I don't think you need to dotwo different conversion files. simple conversion script #!/bin/csh var2pipe -in ./fid -noaswap \ -xN...
1017
Michelle Reed
reedma2000
Aug 5, 2005 3:40 pm
Thanks very much indeed to Frank Delaglio, Shaheen Shojania and Srinivasan Chandra Shekar for giving me so much help with this. This script below given me by...
1018
Mumdooh A. Mohammed
mumdonar
Aug 5, 2005 11:33 pm
Hi All, I am trying to extract a set of 1D's from 2D spectrum, in order to integrate the peaks of these individual 1D's. I searched for specific functions to...
1019
jiang_hong10
Aug 6, 2005 2:26 pm
Dear everyone, I have one ct-cosy H-H spectrum. I want to extract the dipolar couplings. And so what I need is the ratio of the internsity of autopeaks and...
1020
Tieying Zhang
ethernet3399
Aug 8, 2005 10:59 am
Dear Jiang Hong, Maybe you can use the software Sparky to fulfill your goal. The software Sparky can do the integration and peak picking et al. You can...
1021
sivachemist
Aug 8, 2005 5:43 pm
Dear all, I had run a HNCA expt. for my protein with watergate (states-tppi in both dimension).In the xwinnmr processing of the xz plane (H-Ca) plane, only...
1022
jiang_hong10
Aug 11, 2005 8:48 pm
hi,friends, I want to get the dipolar couplings of carbohydrates. Sounds like ACME is a good tool to extract the dipolar couplings. The questions here are: 1....
1023
Joseph J Barchi Jr
barchi@...
Aug 12, 2005 9:12 pm
Hi, Try contacting either Daron Freedburg at the FDA daron_freedberg@...; 1401 Rockville Pike, HFM-419 Rockville, Maryland 20852 Phone (301) 496-0837 or C....
1024
fabioagnelli
Aug 15, 2005 6:23 pm
Greetings everyone, I recently switched to OS X and I get some odd bugs when running Draw. For example: 1D spectra show a "cloud of dots" around the whole...
1025
Frank Delaglio
bigfdelaglio
Aug 15, 2005 7:42 pm
Indeed, I've heard from elsewhere that OS X 10.4 seems to offer some problems for use of NMRDraw. Now, I ordered a version of OS X 10.4 to debug this problem. ...
1026
jiang_hong10
Aug 15, 2005 9:36 pm
When we use "readROI" to extract the 1D summation projection of a 2D region. The output is *.dat. We can open *.dat with nmrDraw. Can we apply a Gaussian or...
1027
happyquevan
Aug 17, 2005 4:42 pm
Hi, I have installed NMRPipe on a Sun Ultra 10 running Solaris 8 and was going through the installation tests. Everything went fine except for "man nmrPipe"....
1028
Geoff Armstrong
geoff_armstrong
Aug 22, 2005 2:34 pm
Hi Que, Could the permissions on /tmp be wrong? You should have read and write access to that directory. That's my best guess. Geoff ... Geoffrey Armstrong,...
1029
happyquevan
Aug 23, 2005 1:47 pm
Geoff, Thanks for the reply. Tim Burrow gave me the same suggestion and it fixed the problem. I didn't know about "sticky bit" either until he pointed them...
1030
Frank Delaglio
bigfdelaglio
Aug 23, 2005 6:56 pm
Dear Friends ... We just posted a new version of the software, which might work a little better for those folks using Mac OS X 10.4 ... -f "the magic piper of...
1031
chem007da
Aug 31, 2005 12:36 pm
I have recently been trying to install the new nmrpipe on my mac and when I run install.com it gives the error that the nmrpipe.mac.tar.Z file is not in gzip...
1032
Frank Delaglio
bigfdelaglio
Aug 31, 2005 1:13 pm
The currently posted file "nmrpipe.mac.tar.Z" should be 21923342 bytes. Try deleting the existing files and downloading again ... -f...
1033
chem007da
Aug 31, 2005 2:33 pm
The new file worked, thanks everyone...
1034
Sara Kunz
kunzsd
Sep 7, 2005 7:53 pm
I am sending along this information on behalf of Sasi Conte at King's College London. Sara Kunz Brandeis ...
