Hi Frank, Thank you very much. Your suggestion helped me to solve the problem. In fact, the pulse sequence header file has acquisition order as 312, which I...
1993
Frank Delaglio
bigfdelaglio
Sep 1, 2009 5:56 pm
Good questions. Here are some comments: 1. The noise estimation details used by autoFit.tcl were recently improved ... if you search the text of the script,...
1994
jcabellovillegas
jcabellovill...
Sep 2, 2009 6:04 pm
Great, thanks a lot Frank for such a detailed explanation. So I think I'm mixing terms. The noise level is not the same as baseline, right? I was asking about...
1995
m73682
Sep 11, 2009 4:23 pm
Hi, How can I convert XEASY / NEASY / CARA data back to nmrPipe format? Cheers, Martin...
1996
Shaheen Shojania
umshoja0
Sep 11, 2009 6:23 pm
Check the ccpn website (Collaborative Computing Project for NMR). I believe it has a conversion tool for many formats including Xeasy. Shaheen ... -- Shaheen...
1997
Frank Delaglio
bigfdelaglio
Sep 17, 2009 1:36 pm
HUZZAH!!! Greetings dear Pipers ... some news for the Mac fans, according to information kindly provided by Chris Waudby of University College London, the...
1998
Ryan McKay
ryan_nanuc
Sep 18, 2009 3:45 pm
I can confirm that. So far no issues. R On 2009-09-17, at 7:22 AM, Frank Delaglio wrote: HUZZAH!!! Greetings dear Pipers ... some news for the Mac fans,...
1999
jamil saad
jamil_emory
Sep 18, 2009 6:00 pm
I second Chris. No problems so far. ________________________________ From: Ryan McKay <ryan@...> To: nmrpipe@yahoogroups.com Sent: Friday, September 18,...
2000
VictorJara
v_jaravine
Sep 28, 2009 8:29 pm
We do a lot of processing with NmrPipe ! My compliments to Frank Delaglio's group. Victor Jaravine ... The research group of Prof. Peter Güntert at the...
2001
Frank Delaglio
bigfdelaglio
Oct 7, 2009 11:05 pm
Most Dear Colleagues, New demos for reconstruction of Non-Uniform Sampling (NUS) data have just been posted at the NMRPipe download site ... the NUS...
2002
georgeluchina
Oct 29, 2009 7:18 pm
Hello all, I just found this post online, and I am actually using the "estimate noise" toggle in nmrDraw a lot. Thanks to this post by Frank, I saw that we...
2003
Frank Delaglio
bigfdelaglio
Oct 29, 2009 8:23 pm
Hi George, A section of an earlier post about noise estimation is below. The noise estimation is supposed to estimate the standard deviation in the baseline of...
2005
jhhong7546
Nov 6, 2009 3:28 am
Dear everyone. Is there anybody who has an experience in relaxation dispersion, especially with varian machine? I want to try it to characterize the very...
2006
Frank Delaglio
bigfdelaglio
Nov 6, 2009 5:41 pm
SORRY!!! This problem has been discussed in earlier posts. Just get a new version of the software. Uncharacteristically for NMRPipe, "nlinLS" has a hard-wired...
2007
Ryan McKay
ryan_nanuc
Nov 9, 2009 7:47 pm
I believe Professor Leo Spyracopoulos at the University of Alberta has Mathematica notebooks on his website available for download that do the processing. If...
2008
georgeluchina
Nov 17, 2009 6:33 pm
I just tried out the 2D NUS demo. The $noise variable in the mem.com script can be shown successfully in "echo $noise", but is not recognized in the nmrpipe...
2009
Frank Delaglio
bigfdelaglio
Nov 18, 2009 12:43 pm
I expect that this problem concerns the default shell for the particular user. As you all know, the various NMRPipe scripts expect that the user's default...
2010
Sampo Mantylahti
pinegulf
Dec 1, 2009 2:31 pm
An exelent software. One question if I may. Situation: I'm working on a new sequence and I have one 3D fid, which contains both in-phase - and antiphase parts....
2011
Jeri Monika
jeri.monika
Dec 1, 2009 4:42 pm
A catalyst is a substance which asters the speed of a chemical reaction without itself undergoing any chemical change and the phenomenon is known as catalysis....
2012
Gregg Siegal
g.siegal@...
Dec 1, 2009 5:22 pm
That's a fairly presumptuous posting! Jeri Monika wrote: A catalyst is a substance which asters the speed of a chemical reaction without itself undergoing any...
2013
Frank Delaglio
bigfdelaglio
Dec 1, 2009 9:14 pm
There are several tools available that relate to this. As mentioned, one is the stand-alone program "addNMR" which can form weighted sums and differences of...
2014
Frank Delaglio
bigfdelaglio
Dec 1, 2009 9:21 pm
Sorry, this one got by us. At least it is not a note about "enhancement" ... Cheerful Regards, big fd...
2015
hoa_ibt
Dec 3, 2009 10:39 pm
Dear xiaohuxj83 and NMR users, I also have questions regarding to addition of number of scans from the individual 3D solid state NMR experiments which have the...
2016
Frank Delaglio
bigfdelaglio
Dec 3, 2009 11:13 pm
Try "addNMR -help" ... here is the long version ... Program "addNMR" works with NMRPipe format 1D-4D data. In the case below, it was probably a mistake to save...
2017
Ryan McKay
ryan_nanuc
Dec 8, 2009 5:02 pm
Hey there, Looks like the default X11 on OSX 10.6 isn't playing nice again with the 2D settings sub menu. Anyone already figure out how to fix it? Or am I...
2018
Ryan McKay
ryan_nanuc
Dec 8, 2009 6:14 pm
As Frank just reminded me the 10.6 update overwrite the default X11 preferences. To get NMRDraw to work properly one has to re-activate the preference for...
2019
Tara Sprules
tarasprules
Dec 9, 2009 8:42 pm
Hi, I have a 3D dataset as a single file in nmrPipe format (test.ft3). I can read it with nmrDraw, and go through all the planes to look at the data, but I...
2020
Frank Delaglio
bigfdelaglio
Dec 10, 2009 12:44 am
maybe this would do it: pipe2xyz -in test.ft3 -out ft/test%03d.ft3 pipe2xyz -in test.ft2 -out test.nv -nv...
2021
Jinwon Jung
jinwon.jung
Dec 10, 2009 12:45 am
Hi Tara try : piep2xyz -verb -x -nv -in test.ft3 -out test.nv Because test.ft3 is already in pipe format, you don't have to xyz2pipe to convert it pipe format...
2022
Tara Sprules
tarasprules
Dec 10, 2009 3:50 pm
Thanks... I should have thought a little more about what pipe2xyz, and xyz2pipe actualy stand for! ... ********************************************* Dr. Tara...
